Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444680_10149 | Not Available | Negative | 58745 - 59533 | 26845.6 |
| hypothetical protein | SAMN05444680_10150 | Not Available | Positive | 59637 - 59888 | 8454.47 |
| Trna-pro | Not Available | Not Available | Positive | 59935 - 60011 | Not Available |
| gst-like protein | SAMN05444680_10152 | Not Available | Negative | 60062 - 60766 | 26492.8 |
| thioredoxin reductase (nadph) | SAMN05444680_10153 | Not Available | Negative | 60840 - 62522 | 59216.2 |
| ornithine-acyl[acyl carrier protein] n-acyltransferase | SAMN05444680_10154 | Not Available | Positive | 62666 - 63541 | 32291.7 |
| polyphosphate kinase | SAMN05444680_10155 | Not Available | Positive | 63648 - 65783 | 79794.1 |
| phosphohistidine phosphatase, sixa | SAMN05444680_10156 | Not Available | Positive | 65788 - 66249 | 17128.6 |
| hypothetical protein | SAMN05444680_10157 | Not Available | Negative | 66228 - 66326 | 3358.9 |
| ppx/gppa phosphatase | SAMN05444680_10158 | Not Available | Negative | 66269 - 67804 | 56524.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
