Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase iii | SAMN05444680_10252 | Not Available | Positive | 1094692 - 1095669 | 34023.0 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN05444680_10253 | Not Available | Positive | 1095715 - 1096668 | 32565.4 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN05444680_10254 | Not Available | Positive | 1096693 - 1097436 | 25523.0 |
| acyl carrier protein | SAMN05444680_10255 | Not Available | Positive | 1097536 - 1097775 | 8643.06 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | SAMN05444680_10256 | Not Available | Positive | 1097870 - 1099114 | 43784.1 |
| hypothetical protein | SAMN05444680_10257 | Not Available | Positive | 1099130 - 1099615 | 17636.5 |
| rna polymerase, sigma-24 subunit, rpoe | SAMN05444680_10258 | Not Available | Positive | 1099612 - 1100286 | 24971.7 |
| anti sigma-e protein, rsea | SAMN05444680_10259 | Not Available | Positive | 1100300 - 1100944 | 22900.1 |
| sigma e regulatory protein, mucb/rseb | SAMN05444680_10260 | Not Available | Positive | 1100996 - 1102012 | 37301.4 |
| serine protease do | SAMN05444680_10261 | Not Available | Positive | 1102067 - 1103542 | 52261.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
