Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine955/2504/2580 synthase | SAMN05444680_10242 | Not Available | Positive | 1086982 - 1088046 | 38649.8 |
| phosphoglycolate phosphatase | SAMN05444680_10243 | Not Available | Positive | 1088039 - 1088707 | 24138.7 |
| ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase | SAMN05444680_10244 | Not Available | Positive | 1088718 - 1089083 | 13247.7 |
| protease-4 | SAMN05444680_10245 | Not Available | Positive | 1089085 - 1090128 | 37740.0 |
| fucose permease | SAMN05444680_10246 | Not Available | Negative | 1090130 - 1091278 | 39126.3 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05444680_10247 | Not Available | Negative | 1091293 - 1092060 | 27448.1 |
| septum formation protein | SAMN05444680_10248 | Not Available | Negative | 1092057 - 1092638 | 20986.4 |
| uncharacterized protein | SAMN05444680_10249 | Not Available | Positive | 1092675 - 1093223 | 20146.6 |
| lsu ribosomal protein l32p | SAMN05444680_10250 | Not Available | Positive | 1093365 - 1093547 | 6630.0 |
| phosphate:acyl-[acyl carrier protein] acyltransferase | SAMN05444680_10251 | Not Available | Positive | 1093667 - 1094692 | 35845.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
