Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-protein kinase etk/wzc | SAMN05444680_10232 | Not Available | Positive | 1072108 - 1074363 | 81461.9 |
| colanic acid biosynthesis glycosyl transferase wcai | SAMN05444680_10233 | Not Available | Negative | 1074377 - 1075609 | 45349.0 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444680_10234 | Not Available | Negative | 1075616 - 1076737 | 41264.2 |
| o-antigen polysaccharide polymerase wzy | SAMN05444680_10235 | Not Available | Negative | 1076824 - 1078179 | 49030.7 |
| acetyltransferase (isoleucine patch superfamily) | SAMN05444680_10236 | Not Available | Negative | 1078176 - 1078853 | 24416.6 |
| hypothetical protein | SAMN05444680_10237 | Not Available | Negative | 1078850 - 1079824 | 35520.2 |
| gdp-l-fucose synthase | SAMN05444680_10238 | Not Available | Negative | 1079853 - 1080818 | 35643.7 |
| mannose-1-phosphate guanylyltransferase (gdp) /mannose-6-phosphate isomerase, type 2 | SAMN05444680_10239 | Not Available | Negative | 1080850 - 1082289 | 52129.4 |
| sugar transferase involved in lps biosynthesis (colanic, teichoic acid) | SAMN05444680_10240 | Not Available | Negative | 1082286 - 1083008 | 27724.4 |
| rnase e | SAMN05444680_10241 | Not Available | Negative | 1083489 - 1086455 | 108205.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
