Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, lytt family, sensor histidine kinase algz | SAMN05444680_10222 | Not Available | Positive | 1060034 - 1061143 | 39406.4 |
| two component transcriptional regulator, lyttr family | SAMN05444680_10223 | Not Available | Positive | 1061140 - 1061889 | 28012.7 |
| predicted purr-regulated permease perm | SAMN05444680_10224 | Not Available | Positive | 1061886 - 1063055 | 41384.3 |
| phosphoenolpyruvate carboxylase, type 1 | SAMN05444680_10225 | Not Available | Negative | 1063179 - 1066109 | 107478.0 |
| hydroxymethylbilane synthase | SAMN05444680_10226 | Not Available | Positive | 1066206 - 1067111 | 32022.6 |
| uroporphyrinogen-iii synthase | SAMN05444680_10227 | Not Available | Positive | 1067113 - 1067883 | 27104.1 |
| uroporphyrin-3 c-methyltransferase | SAMN05444680_10228 | Not Available | Positive | 1067880 - 1068956 | 38458.7 |
| hemy protein | SAMN05444680_10229 | Not Available | Positive | 1068962 - 1070245 | 47178.0 |
| polysaccharide export outer membrane protein | SAMN05444680_10230 | Not Available | Positive | 1070488 - 1071654 | 41048.5 |
| protein-tyrosine phosphatase | SAMN05444680_10231 | Not Available | Positive | 1071623 - 1072108 | 17807.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
