Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized domain 1-containing protein | SAMN05444680_10212 | Not Available | Negative | 1045278 - 1045682 | 14269.6 |
| hypothetical protein | SAMN05444680_10213 | Not Available | Negative | 1045715 - 1045990 | 9996.8 |
| hypothetical protein | SAMN05444680_10214 | Not Available | Negative | 1046072 - 1052029 | 215515.0 |
| glycosyl transferases group 1 | SAMN05444680_10215 | Not Available | Positive | 1052115 - 1053356 | 46438.0 |
| hypothetical protein | SAMN05444680_10216 | Not Available | Positive | 1053397 - 1054551 | 43151.3 |
| lysophospholipase l1 | SAMN05444680_10217 | Not Available | Negative | 1054528 - 1055280 | 27578.0 |
| udp-glucose dehydrogenase | SAMN05444680_10218 | Not Available | Negative | 1055280 - 1056653 | 49814.5 |
| udp-glucuronate decarboxylase | SAMN05444680_10219 | Not Available | Negative | 1056658 - 1057629 | 36486.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444680_10220 | Not Available | Negative | 1057650 - 1058495 | 32456.8 |
| argininosuccinate lyase | SAMN05444680_10221 | Not Available | Negative | 1058614 - 1060011 | 51251.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
