Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-4 | SAMN05444680_1022 | Not Available | Negative | 1033538 - 1034794 | 45909.6 |
| hypothetical protein | SAMN05444680_1023 | Not Available | Positive | 1034857 - 1035426 | 21790.6 |
| mfs transporter, mhs family, alpha-ketoglutarate permease | SAMN05444680_1024 | Not Available | Negative | 1035434 - 1036771 | 48278.4 |
| l-lactate dehydrogenase (cytochrome) | SAMN05444680_1025 | Not Available | Negative | 1036860 - 1038017 | 42158.0 |
| lactate permease | SAMN05444680_1026 | Not Available | Positive | 1038112 - 1039779 | 58789.1 |
| ketopantoate reductase | SAMN05444680_1027 | Not Available | Positive | 1039796 - 1040728 | 32559.6 |
| penicillin-binding protein 1c | SAMN05444680_1028 | Not Available | Negative | 1041033 - 1043204 | 77830.5 |
| hypothetical protein | SAMN05444680_1029 | Not Available | Negative | 1043241 - 1044161 | 33908.6 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05444680_10210 | Not Available | Negative | 1044217 - 1044843 | 22234.8 |
| hypothetical protein | SAMN05444680_10211 | Not Available | Negative | 1045004 - 1045276 | 9634.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
