Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyd operon protein ybgt | SAMN05444680_101974 | Not Available | Negative | 1021522 - 1021653 | 5073.05 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | SAMN05444680_101975 | Not Available | Negative | 1021686 - 1022840 | 41640.7 |
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | SAMN05444680_101976 | Not Available | Negative | 1022857 - 1024458 | 58513.9 |
| atp-binding cassette, subfamily c, cydc | SAMN05444680_101977 | Not Available | Negative | 1024493 - 1026181 | 59004.5 |
| atp-binding cassette, subfamily c, cydd | SAMN05444680_101978 | Not Available | Negative | 1026178 - 1027830 | 57377.1 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444680_101979 | Not Available | Positive | 1028013 - 1029116 | 40775.1 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05444680_101980 | Not Available | Negative | 1029113 - 1030270 | 41618.9 |
| nitronate monooxygenase | SAMN05444680_101981 | Not Available | Negative | 1030281 - 1031240 | 33454.1 |
| hypothetical protein | SAMN05444680_101982 | Not Available | Negative | 1031333 - 1031623 | 10010.2 |
| purine nucleoside permease | SAMN05444680_1021 | Not Available | Positive | 1032483 - 1033511 | 37405.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
