Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-hydroxyisourate hydrolase | SAMN05444680_101954 | Not Available | Positive | 1003707 - 1004195 | 17793.3 |
| 5-hydroxyisourate hydrolase | SAMN05444680_101955 | Not Available | Positive | 1004346 - 1004699 | 12832.2 |
| 3-oxoadipate enol-lactonase | SAMN05444680_101956 | Not Available | Negative | 1004703 - 1005467 | 26835.9 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN05444680_101957 | Not Available | Negative | 1005464 - 1006672 | 41894.2 |
| hypothetical protein | SAMN05444680_101958 | Not Available | Negative | 1006669 - 1006848 | 6428.47 |
| 3-carboxy-cis,cis-muconate cycloisomerase | SAMN05444680_101959 | Not Available | Negative | 1006845 - 1008056 | 42597.5 |
| shikimate dehydrogenase | SAMN05444680_101960 | Not Available | Negative | 1008070 - 1008903 | 29432.6 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05444680_101961 | Not Available | Negative | 1008925 - 1009692 | 27495.8 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444680_101962 | Not Available | Negative | 1009695 - 1010441 | 26777.8 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444680_101963 | Not Available | Negative | 1010500 - 1011495 | 35472.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
