Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ergothioneine biosynthesis protein egtb | SAMN05444680_101944 | Not Available | Negative | 993276 - 994523 | 46098.3 |
| nadh dehydrogenase | SAMN05444680_101945 | Not Available | Positive | 994670 - 996043 | 48986.0 |
| activator of hsp90 atpase homolog 1-like protein | SAMN05444680_101946 | Not Available | Positive | 996040 - 996486 | 16638.4 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05444680_101947 | Not Available | Positive | 996493 - 996978 | 17028.8 |
| uncharacterized conserved protein, duf1501 family | SAMN05444680_101948 | Not Available | Negative | 996988 - 998199 | 43434.0 |
| uncharacterized conserved protein, duf1800 family | SAMN05444680_101949 | Not Available | Negative | 998211 - 999773 | 57673.9 |
| predicted dithiol-disulfide isomerase, dsba family | SAMN05444680_101950 | Not Available | Negative | 999860 - 1000546 | 25170.9 |
| dna-binding transcriptional regulator, lysr family | SAMN05444680_101951 | Not Available | Negative | 1000604 - 1001542 | 34570.7 |
| sugar phosphate permease | SAMN05444680_101952 | Not Available | Positive | 1001689 - 1003026 | 48223.9 |
| 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase | SAMN05444680_101953 | Not Available | Positive | 1003026 - 1003556 | 19660.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
