Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. YR216 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1243614 bp
Thymine Count
1246362 bp
Guanine Count
2445666 bp
Cytosine Count
2435852 bp
Genome Length
7371494 bp
Protein-coding Genes
6957 genes
Non-Coding Genes
84 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05444680_10139 | Not Available | Negative | 42737 - 43654 | 33516.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444680_10140 | Not Available | Positive | 43750 - 44739 | 34407.8 |
| d-3-phosphoglycerate dehydrogenase | SAMN05444680_10141 | Not Available | Positive | 44760 - 45734 | 33301.4 |
| regulator of rnase e activity rraa | SAMN05444680_10142 | Not Available | Positive | 45773 - 46471 | 24364.6 |
| l-lactate dehydrogenase (cytochrome) | SAMN05444680_10143 | Not Available | Positive | 46468 - 47724 | 44877.1 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444680_10144 | Not Available | Negative | 47740 - 48657 | 33389.4 |
| amino acid adenylation domain-containing protein | SAMN05444680_10145 | Not Available | Negative | 48808 - 55347 | 239474.0 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | SAMN05444680_10146 | Not Available | Negative | 55371 - 57215 | 64504.9 |
| (s)-mandelate dehydrogenase | SAMN05444680_10147 | Not Available | Positive | 57417 - 58580 | 41944.4 |
| Trna-arg | Not Available | Not Available | Positive | 58614 - 58690 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
