Alkalimonas amylolytica strain CGMCC 1.3430

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadales_Incertae_Sedis

Genus

Alkalimonas

Description

Alkalimonas amylolytica strain CGMCC 1.3430 is characterized by the presence of a single replicon, which indicates a streamlined genomic architecture. This trait can be significant in understanding the organism's genetic stability and adaptability in various environments. The genomic sequence of this strain is accessible under the accession number FNRM00000000.1, allowing for further analysis and comparative studies with other strains. The designation "amylolytica" suggests that this strain has the capability to hydrolyze starch, which is an important trait for its ecological role in carbohydrate metabolism. Such enzymatic activity is crucial for breaking down complex carbohydrates into simpler sugars, which can then be utilized by various organisms in its environment, contributing to nutrient cycling. Understanding Alkalimonas amylolytica's metabolic capabilities and genetic framework is essential for exploring its potential applications in biotechnology, particularly in processes involving starch degradation. Overall, the traits of Alkalimonas amylolytica strain CGMCC 1.3430 highlight its significance in microbial ecology and its potential utility in industrial applications where starch degradation is of interest.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadales_Incertae_Sedis
GenusAlkalimonas
SpeciesAlkalimonas amylolytica
Strainstrain CGMCC 1.3430

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alkalimonas amylolytica strain CGMCC 1.3430 genome assembly,

Gene Summary

Adenine Count

1000554 bp

Thymine Count

963989 bp

Guanine Count

1010703 bp

Cytosine Count

1077559 bp

Genome Length

4060055 bp

Protein-coding Genes

3637 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphonate transport system atp-binding proteinSAMN04488051_11433Not AvailablePositive3880067 - 388083128327.5
phosphonate transport system permease proteinSAMN04488051_11434Not AvailablePositive3880831 - 388190439665.2
alanine or glycine:cation symporter, agcs familySAMN04488051_11435Not AvailableNegative3881912 - 388330349733.5
alanine-synthesizing transaminaseSAMN04488051_11436Not AvailableNegative3883313 - 388452745232.4
hypothetical proteinSAMN04488051_11437Not AvailableNegative3884637 - 388525722869.2
bax proteinSAMN04488051_11438Not AvailablePositive3885540 - 388644534798.8
trna 2-thiocytidine biosynthesis protein ttcaSAMN04488051_11439Not AvailableNegative3886523 - 388744333902.2
universal stress protein eSAMN04488051_11440Not AvailableNegative3887521 - 388845034831.7
crp/fnr family transcriptional regulator, anaerobic regulatory proteinSAMN04488051_11441Not AvailableNegative3888587 - 388930326709.3
hypothetical proteinSAMN04488051_11442Not AvailableNegative3889339 - 389001624121.4

Displaying genes 3541 – 3550 of 3700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.