Alkalimonas amylolytica strain CGMCC 1.3430

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadales_Incertae_Sedis

Genus

Alkalimonas

Description

Alkalimonas amylolytica strain CGMCC 1.3430 is characterized by the presence of a single replicon, which indicates a streamlined genomic architecture. This trait can be significant in understanding the organism's genetic stability and adaptability in various environments. The genomic sequence of this strain is accessible under the accession number FNRM00000000.1, allowing for further analysis and comparative studies with other strains. The designation "amylolytica" suggests that this strain has the capability to hydrolyze starch, which is an important trait for its ecological role in carbohydrate metabolism. Such enzymatic activity is crucial for breaking down complex carbohydrates into simpler sugars, which can then be utilized by various organisms in its environment, contributing to nutrient cycling. Understanding Alkalimonas amylolytica's metabolic capabilities and genetic framework is essential for exploring its potential applications in biotechnology, particularly in processes involving starch degradation. Overall, the traits of Alkalimonas amylolytica strain CGMCC 1.3430 highlight its significance in microbial ecology and its potential utility in industrial applications where starch degradation is of interest.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadales_Incertae_Sedis
GenusAlkalimonas
SpeciesAlkalimonas amylolytica
Strainstrain CGMCC 1.3430

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alkalimonas amylolytica strain CGMCC 1.3430 genome assembly,

Gene Summary

Adenine Count

1000554 bp

Thymine Count

963989 bp

Guanine Count

1010703 bp

Cytosine Count

1077559 bp

Genome Length

4060055 bp

Protein-coding Genes

3637 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna nucleotidyltransferase (cca-adding enzyme)SAMN04488051_101324Not AvailablePositive365827 - 36707746601.4
predicted membrane proteinSAMN04488051_101325Not AvailableNegative367079 - 36793031261.8
arac-type dna-binding proteinSAMN04488051_101326Not AvailablePositive368100 - 36919739656.9
secondary thiamine-phosphate synthase enzymeSAMN04488051_101327Not AvailableNegative369240 - 36966215780.6
predicted transcriptional regulatorSAMN04488051_101328Not AvailablePositive369844 - 37024214751.7
blar1 peptidase m56SAMN04488051_101329Not AvailablePositive370244 - 37162951657.9
murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domainSAMN04488051_101330Not AvailablePositive371794 - 37313450205.7
polysaccharide deacetylaseSAMN04488051_101331Not AvailablePositive373205 - 37411034103.3
predicted nuclease of restriction endonuclease-like (recb) superfamily, duf1016 familySAMN04488051_101332Not AvailablePositive374077 - 37505738657.7
aconitaseSAMN04488051_101333Not AvailableNegative375106 - 37770393716.4

Displaying genes 331 – 340 of 3700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.