Alkalimonas amylolytica strain CGMCC 1.3430

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadales_Incertae_Sedis

Genus

Alkalimonas

Description

Alkalimonas amylolytica strain CGMCC 1.3430 is characterized by the presence of a single replicon, which indicates a streamlined genomic architecture. This trait can be significant in understanding the organism's genetic stability and adaptability in various environments. The genomic sequence of this strain is accessible under the accession number FNRM00000000.1, allowing for further analysis and comparative studies with other strains. The designation "amylolytica" suggests that this strain has the capability to hydrolyze starch, which is an important trait for its ecological role in carbohydrate metabolism. Such enzymatic activity is crucial for breaking down complex carbohydrates into simpler sugars, which can then be utilized by various organisms in its environment, contributing to nutrient cycling. Understanding Alkalimonas amylolytica's metabolic capabilities and genetic framework is essential for exploring its potential applications in biotechnology, particularly in processes involving starch degradation. Overall, the traits of Alkalimonas amylolytica strain CGMCC 1.3430 highlight its significance in microbial ecology and its potential utility in industrial applications where starch degradation is of interest.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadales_Incertae_Sedis
GenusAlkalimonas
SpeciesAlkalimonas amylolytica
Strainstrain CGMCC 1.3430

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alkalimonas amylolytica strain CGMCC 1.3430 genome assembly,

Gene Summary

Adenine Count

1000554 bp

Thymine Count

963989 bp

Guanine Count

1010703 bp

Cytosine Count

1077559 bp

Genome Length

4060055 bp

Protein-coding Genes

3637 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
kdo2-lipid iv(a) lauroyltransferaseSAMN04488051_101314Not AvailablePositive352264 - 35318735301.0
toxin co-regulated pilus biosynthesis protein qSAMN04488051_101315Not AvailablePositive353198 - 35380023145.6
glutamate-ammonia-ligase adenylyltransferaseSAMN04488051_101316Not AvailableNegative353797 - 356592105374.0
cyth domain-containing proteinSAMN04488051_101317Not AvailableNegative356601 - 35752734775.0
sh3 domain proteinSAMN04488051_101318Not AvailablePositive357675 - 35827422336.6
lrp/asnc family transcriptional regulator, leucine-responsive regulatory proteinSAMN04488051_101319Not AvailableNegative358306 - 35879118355.4
l-proline dehydrogenase /delta-1-pyrroline-5-carboxylate dehydrogenaseSAMN04488051_101320Not AvailablePositive358937 - 362707137765.0
hd-gyp domain, c-di-gmp phosphodiesterase class ii (or its inactivated variant)SAMN04488051_101321Not AvailablePositive362870 - 36401842285.9
type ii secretion system protein bSAMN04488051_101322Not AvailableNegative364020 - 36477527344.6
general secretion pathway protein aSAMN04488051_101323Not AvailableNegative364865 - 36577933711.4

Displaying genes 321 – 330 of 3700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.