Alkalimonas amylolytica strain CGMCC 1.3430

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadales_Incertae_Sedis

Genus

Alkalimonas

Description

Alkalimonas amylolytica strain CGMCC 1.3430 is characterized by the presence of a single replicon, which indicates a streamlined genomic architecture. This trait can be significant in understanding the organism's genetic stability and adaptability in various environments. The genomic sequence of this strain is accessible under the accession number FNRM00000000.1, allowing for further analysis and comparative studies with other strains. The designation "amylolytica" suggests that this strain has the capability to hydrolyze starch, which is an important trait for its ecological role in carbohydrate metabolism. Such enzymatic activity is crucial for breaking down complex carbohydrates into simpler sugars, which can then be utilized by various organisms in its environment, contributing to nutrient cycling. Understanding Alkalimonas amylolytica's metabolic capabilities and genetic framework is essential for exploring its potential applications in biotechnology, particularly in processes involving starch degradation. Overall, the traits of Alkalimonas amylolytica strain CGMCC 1.3430 highlight its significance in microbial ecology and its potential utility in industrial applications where starch degradation is of interest.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadales_Incertae_Sedis
GenusAlkalimonas
SpeciesAlkalimonas amylolytica
Strainstrain CGMCC 1.3430

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alkalimonas amylolytica strain CGMCC 1.3430 genome assembly,

Gene Summary

Adenine Count

1000554 bp

Thymine Count

963989 bp

Guanine Count

1010703 bp

Cytosine Count

1077559 bp

Genome Length

4060055 bp

Protein-coding Genes

3637 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribosome-associated proteinSAMN04488051_104269Not AvailablePositive2274116 - 227443611772.1
23s rrna (pseudouridine1915-n3)-methyltransferaseSAMN04488051_104270Not AvailablePositive2274433 - 227490317406.2
penicillin-binding protein 2SAMN04488051_104271Not AvailablePositive2274906 - 227676869426.5
rod shape determining protein rodaSAMN04488051_104272Not AvailablePositive2276765 - 227788340691.6
rare lipoprotein aSAMN04488051_104273Not AvailablePositive2277899 - 227879232991.3
d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6)SAMN04488051_104274Not AvailablePositive2278834 - 227998242505.1
hypothetical proteinSAMN04488051_104275Not AvailablePositive2280070 - 228035110438.7
lipoyl(octanoyl) transferaseSAMN04488051_104276Not AvailablePositive2280351 - 228101324595.8
lipoic acid synthetaseSAMN04488051_104277Not AvailablePositive2281006 - 228198936852.8
diguanylate cyclase (ggdef) domain-containing proteinSAMN04488051_104278Not AvailableNegative2281990 - 228351056400.9

Displaying genes 2061 – 2070 of 3700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.