Alkalimonas amylolytica strain CGMCC 1.3430

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Alteromonadales_Incertae_Sedis

Genus

Alkalimonas

Description

Alkalimonas amylolytica strain CGMCC 1.3430 is characterized by the presence of a single replicon, which indicates a streamlined genomic architecture. This trait can be significant in understanding the organism's genetic stability and adaptability in various environments. The genomic sequence of this strain is accessible under the accession number FNRM00000000.1, allowing for further analysis and comparative studies with other strains. The designation "amylolytica" suggests that this strain has the capability to hydrolyze starch, which is an important trait for its ecological role in carbohydrate metabolism. Such enzymatic activity is crucial for breaking down complex carbohydrates into simpler sugars, which can then be utilized by various organisms in its environment, contributing to nutrient cycling. Understanding Alkalimonas amylolytica's metabolic capabilities and genetic framework is essential for exploring its potential applications in biotechnology, particularly in processes involving starch degradation. Overall, the traits of Alkalimonas amylolytica strain CGMCC 1.3430 highlight its significance in microbial ecology and its potential utility in industrial applications where starch degradation is of interest.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyAlteromonadales_Incertae_Sedis
GenusAlkalimonas
SpeciesAlkalimonas amylolytica
Strainstrain CGMCC 1.3430

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alkalimonas amylolytica strain CGMCC 1.3430 genome assembly,

Gene Summary

Adenine Count

1000554 bp

Thymine Count

963989 bp

Guanine Count

1010703 bp

Cytosine Count

1077559 bp

Genome Length

4060055 bp

Protein-coding Genes

3637 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
heme-degrading monooxygenase hmoaSAMN04488051_102289Not AvailableNegative1111418 - 111173511969.2
prolyl oligopeptidase family proteinSAMN04488051_102290Not AvailableNegative1111806 - 111276836266.3
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferaseSAMN04488051_102291Not AvailableNegative1112858 - 111388938509.2
protein of unknown functionSAMN04488051_102292Not AvailableNegative1113889 - 111489938913.9
two-component system, cell cycle response regulatorSAMN04488051_102293Not AvailablePositive1115743 - 111702347903.4
alpha/beta hydrolase foldSAMN04488051_102294Not AvailableNegative1117034 - 111823642702.3
uncharacterized membrane protein sirb2SAMN04488051_102295Not AvailableNegative1118335 - 111871514169.2
arsenite-transporting atpaseSAMN04488051_102296Not AvailableNegative1118772 - 111977936723.6
hypothetical proteinSAMN04488051_102297Not AvailableNegative1119770 - 112004210753.9
carbon starvation proteinSAMN04488051_102298Not AvailableNegative1120039 - 112172160249.5

Displaying genes 1001 – 1010 of 3700 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.