Eubacterium aggregans strain SR12

Gram-positiveanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Eubacteriaceae

Genus

Eubacterium

Description

Eubacterium aggregans strain SR12 is a Gram-positive bacterium characterized by its anaerobic oxygen requirement, indicating its survival and metabolic activities are optimized for low-oxygen environments. This strain possesses flagella, which suggests a degree of motility that may play a role in its ecological interactions and colonization of substrates in anaerobic habitats. The strain has a single replicon, which is indicative of its genetic organization and replication mechanism. The genomic information for Eubacterium aggregans strain SR12 is cataloged under the accession number FNRK00000000.1, facilitating further research and exploration into its genetic characteristics and potential applications. Ecologically, Eubacterium aggregans is likely adapted to environments where oxygen is scarce, such as in the gastrointestinal tracts of animals or in sediment-rich habitats. Its anaerobic nature suggests a role in the fermentation processes, contributing to the breakdown of organic matter and possibly influencing nutrient cycling within its ecosystem. The presence of flagella may enhance its ability to navigate within these environments, potentially aiding in its interaction with other microorganisms and substrates. Overall, Eubacterium aggregans strain SR12 exemplifies the diverse adaptations of bacteria to anaerobic conditions and their significance in ecological processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyEubacteriaceae
GenusEubacterium
SpeciesEubacterium aggregans
Strainstrain SR12

Profile

Physiology
Gram staining propertiesPositive
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Eubacterium aggregans strain SR12 genome assembly, contig:

Gene Summary

Adenine Count

729763 bp

Thymine Count

725952 bp

Guanine Count

692009 bp

Cytosine Count

685747 bp

Genome Length

2833471 bp

Protein-coding Genes

2671 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uroporphyrinogen decarboxylase (uro-d)SAMN04515656_10540Not AvailableNegative816762 - 81776637423.4
mfs transporter, nnp family, nitrate/nitrite transporterSAMN04515656_10541Not AvailableNegative817796 - 81899842040.4
pucr c-terminal helix-turn-helix domain-containing proteinSAMN04515656_10542Not AvailablePositive819186 - 82071557930.0
4-hydroxythreonine-4-phosphate dehydrogenaseSAMN04515656_10543Not AvailableNegative820773 - 82179536568.8
dihydroxyacetone kinase dhal subunitSAMN04515656_10544Not AvailableNegative821895 - 82254523601.2
dihydroxyacetone kinase dhak subunitSAMN04515656_10545Not AvailableNegative822708 - 82372135962.9
dihydroxyacetone kinase, phosphotransfer subunitSAMN04515656_10546Not AvailableNegative823806 - 82420713968.7
ribose 5-phosphate isomerase bSAMN04515656_10547Not AvailablePositive824482 - 82493416455.6
triosephosphate isomeraseSAMN04515656_10548Not AvailablePositive825039 - 82582428740.6
linear amide c-n hydrolases, choloylglycine hydrolase familySAMN04515656_10549Not AvailablePositive825904 - 82699538968.4

Displaying genes 881 – 890 of 2815 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.