Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN05216462_0003 | Not Available | Positive | 329 - 1018 | 25439.8 |
| protein of unknown function | SAMN05216462_0004 | Not Available | Positive | 1040 - 1630 | 23182.8 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN05216462_0005 | Not Available | Positive | 1636 - 2940 | 47489.1 |
| 16s rrna processing protein rimm | SAMN05216462_0006 | Not Available | Positive | 2945 - 3454 | 19143.8 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN05216462_0007 | Not Available | Positive | 3451 - 4608 | 42483.4 |
| regulator of sigma e protease | SAMN05216462_0008 | Not Available | Positive | 4615 - 6015 | 52419.7 |
| beta-galactosidase | SAMN05216462_0009 | Not Available | Negative | 6174 - 8393 | 84240.3 |
| beta-galactosidase/beta-glucuronidase | SAMN05216462_0010 | Not Available | Negative | 8395 - 13017 | 177344.0 |
| hypothetical protein | SAMN05216462_0011 | Not Available | Negative | 13027 - 13626 | 22096.8 |
| starch-binding associating with outer membrane | SAMN05216462_0012 | Not Available | Negative | 13659 - 15332 | 62946.1 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
