Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | SAMN05216462_1005 | Not Available | Positive | 1270289 - 1270714 | 16014.2 |
| acetyltransferase (isoleucine patch superfamily) | SAMN05216462_1006 | Not Available | Positive | 1270842 - 1271408 | 20436.9 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05216462_1007 | Not Available | Negative | 1271586 - 1272461 | 32506.9 |
| helix-turn-helix domain-containing protein | SAMN05216462_1008 | Not Available | Positive | 1272650 - 1273513 | 33585.3 |
| ribosomal protein s18 acetylase rimi | SAMN05216462_1009 | Not Available | Positive | 1273638 - 1274117 | 18156.1 |
| serine/threonine transporter | SAMN05216462_1010 | Not Available | Negative | 1274136 - 1275353 | 42925.5 |
| cation diffusion facilitator family transporter | SAMN05216462_1011 | Not Available | Positive | 1275521 - 1276624 | 39637.4 |
| ribosomal protein s18 acetylase rimi | SAMN05216462_1012 | Not Available | Positive | 1276666 - 1277127 | 17430.1 |
| protein of unknown function | SAMN05216462_1013 | Not Available | Positive | 1277129 - 1279519 | 89714.4 |
| adenosine deaminase-related growth factor | SAMN05216462_1014 | Not Available | Negative | 1279552 - 1280949 | 52464.5 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
