Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-mannosidase, putative | SAMN05216462_0974 | Not Available | Positive | 1238543 - 1240720 | 80550.5 |
| hypothetical protein | SAMN05216462_0975 | Not Available | Positive | 1240726 - 1242183 | 55216.0 |
| hexosaminidase | SAMN05216462_0976 | Not Available | Negative | 1242225 - 1244477 | 84974.7 |
| hexosaminidase | SAMN05216462_0977 | Not Available | Negative | 1244506 - 1246143 | 61253.5 |
| glucosamine-6-phosphate deaminase | SAMN05216462_0978 | Not Available | Negative | 1246169 - 1247305 | 43284.6 |
| hypothetical protein | SAMN05216462_0979 | Not Available | Positive | 1247419 - 1248081 | 25514.6 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN05216462_0980 | Not Available | Positive | 1248139 - 1249500 | 50070.3 |
| methylenetetrahydrofolate dehydrogenase (nadp+) / methenyltetrahydrofolate cyclohydrolase | SAMN05216462_0981 | Not Available | Positive | 1249512 - 1250390 | 31572.6 |
| tpr repeat-containing protein | SAMN05216462_0982 | Not Available | Positive | 1250390 - 1250569 | 6961.13 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit delta | SAMN05216462_0983 | Not Available | Positive | 1250583 - 1250813 | 8124.05 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
