Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper homeostasis protein | SAMN05216462_0964 | Not Available | Negative | 1215182 - 1215853 | 23946.1 |
| alpha-1,2-mannosidase, putative | SAMN05216462_0965 | Not Available | Negative | 1215868 - 1218048 | 82830.8 |
| beta-glucosidase | SAMN05216462_0966 | Not Available | Negative | 1218049 - 1220397 | 85004.1 |
| alpha-l-fucosidase | SAMN05216462_0967 | Not Available | Negative | 1220401 - 1222206 | 68557.1 |
| alpha-1,2-mannosidase, putative | SAMN05216462_0968 | Not Available | Negative | 1222217 - 1224493 | 86005.6 |
| alpha-l-fucosidase | SAMN05216462_0969 | Not Available | Negative | 1224520 - 1225890 | 53180.3 |
| glycosyl hydrolases family 2, sugar binding domain | SAMN05216462_0970 | Not Available | Positive | 1225952 - 1229566 | 135253.0 |
| alpha-l-rhamnosidase | SAMN05216462_0971 | Not Available | Negative | 1229606 - 1233133 | 131646.0 |
| starch-binding associating with outer membrane | SAMN05216462_0972 | Not Available | Negative | 1233271 - 1234986 | 64284.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_0973 | Not Available | Negative | 1235017 - 1238352 | 122194.0 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
