Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate dehydrogenase (nadp+) | SAMN05216462_0903 | Not Available | Negative | 1141654 - 1142991 | 48968.4 |
| allosteric nadp-dependent malic enzyme | SAMN05216462_0904 | Not Available | Negative | 1143223 - 1145526 | 84695.4 |
| transcriptional regulator, tetr family | SAMN05216462_0905 | Not Available | Positive | 1145645 - 1146268 | 24593.0 |
| protein of unknown function | SAMN05216462_0906 | Not Available | Negative | 1146918 - 1148417 | 55177.8 |
| gtp pyrophosphokinase | SAMN05216462_0907 | Not Available | Positive | 1148505 - 1150598 | 80055.7 |
| hypothetical protein | SAMN05216462_0908 | Not Available | Positive | 1150601 - 1150912 | 11310.3 |
| acetyltransferase (gnat) domain-containing protein | SAMN05216462_0909 | Not Available | Negative | 1150913 - 1151929 | 40385.2 |
| nitroreductase | SAMN05216462_0910 | Not Available | Positive | 1152029 - 1152556 | 19794.7 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase) | SAMN05216462_0911 | Not Available | Positive | 1152584 - 1153102 | 19032.0 |
| septum formation protein | SAMN05216462_0912 | Not Available | Positive | 1153130 - 1153705 | 21265.4 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
