Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein implicated in regulation of membrane protease activity | SAMN05216462_0891 | Not Available | Positive | 1127933 - 1128382 | 16371.1 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN05216462_0892 | Not Available | Positive | 1128418 - 1129362 | 35089.6 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05216462_0893 | Not Available | Positive | 1129380 - 1130267 | 32478.6 |
| arac-type dna-binding protein | SAMN05216462_0894 | Not Available | Positive | 1130271 - 1131155 | 33909.3 |
| rna polymerase primary sigma factor | SAMN05216462_0897 | Not Available | Positive | 1131507 - 1132211 | 26572.8 |
| cache domain-containing protein | SAMN05216462_0898 | Not Available | Positive | 1132347 - 1133318 | 36632.6 |
| methyl-accepting chemotaxis protein | SAMN05216462_0899 | Not Available | Positive | 1133318 - 1134799 | 56498.1 |
| signal transduction histidine kinase | SAMN05216462_0900 | Not Available | Positive | 1134792 - 1136699 | 71363.8 |
| molecular chaperone htpg | SAMN05216462_0901 | Not Available | Negative | 1136742 - 1138796 | 78396.0 |
| small subunit ribosomal protein s1 | SAMN05216462_0902 | Not Available | Negative | 1139532 - 1141310 | 66277.9 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
