Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | SAMN05216462_0861 | Not Available | Positive | 1086823 - 1088283 | 53188.3 |
| hlyd family secretion protein | SAMN05216462_0862 | Not Available | Positive | 1088292 - 1089284 | 36454.9 |
| abc-2 type transport system permease protein | SAMN05216462_0863 | Not Available | Positive | 1089346 - 1090515 | 43692.6 |
| abc-2 type transport system permease protein | SAMN05216462_0864 | Not Available | Positive | 1090499 - 1091701 | 44573.0 |
| hypothetical protein | SAMN05216462_0865 | Not Available | Positive | 1091708 - 1092301 | 22033.3 |
| trna pseudouridine38-40 synthase | SAMN05216462_0866 | Not Available | Positive | 1092295 - 1093050 | 28856.3 |
| uncharacterized membrane protein | SAMN05216462_0867 | Not Available | Positive | 1093094 - 1094011 | 34250.1 |
| uncharacterized protein involved in outer membrane biogenesis | SAMN05216462_0868 | Not Available | Negative | 1094040 - 1098407 | 160464.0 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit a | SAMN05216462_0869 | Not Available | Positive | 1098597 - 1099940 | 49252.3 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit b | SAMN05216462_0870 | Not Available | Positive | 1099945 - 1101105 | 41888.7 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
