Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l34 | SAMN05216462_0809 | Not Available | Positive | 1020962 - 1021117 | 6083.46 |
| pasta domain-containing protein | SAMN05216462_0810 | Not Available | Positive | 1021223 - 1021873 | 23622.3 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05216462_0811 | Not Available | Positive | 1021870 - 1022913 | 39695.4 |
| d-alanine-d-alanine ligase | SAMN05216462_0812 | Not Available | Positive | 1022935 - 1023927 | 36892.9 |
| hypothetical protein | SAMN05216462_0813 | Not Available | Positive | 1023931 - 1025073 | 44110.1 |
| nigd-like protein | SAMN05216462_0814 | Not Available | Positive | 1025070 - 1025747 | 25077.9 |
| alpha-d-xyloside xylohydrolase | SAMN05216462_0815 | Not Available | Negative | 1025744 - 1028002 | 85548.6 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN05216462_0816 | Not Available | Negative | 1028012 - 1029763 | 65964.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_0817 | Not Available | Positive | 1030096 - 1033347 | 119403.0 |
| starch-binding associating with outer membrane | SAMN05216462_0818 | Not Available | Positive | 1033363 - 1035129 | 65290.8 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
