Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secd/secf fusion protein | SAMN05216462_0737 | Not Available | Negative | 939050 - 942082 | 109846.0 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05216462_0738 | Not Available | Negative | 942197 - 943291 | 41621.1 |
| membrane associated serine protease, rhomboid family | SAMN05216462_0739 | Not Available | Negative | 943288 - 944235 | 35807.4 |
| dna-binding protein hu-beta | SAMN05216462_0740 | Not Available | Positive | 944481 - 944753 | 9392.6 |
| gluconate 5-dehydrogenase | SAMN05216462_0741 | Not Available | Negative | 944826 - 945629 | 28880.8 |
| tyrosyl-trna synthetase | SAMN05216462_0743 | Not Available | Negative | 945795 - 947090 | 48934.9 |
| hypothetical protein | SAMN05216462_0744 | Not Available | Negative | 947127 - 947357 | 8549.77 |
| ribonuclease p protein component | SAMN05216462_0745 | Not Available | Negative | 947354 - 947746 | 14983.5 |
| uroporphyrinogen-iii synthase | SAMN05216462_0746 | Not Available | Negative | 947753 - 948502 | 28711.7 |
| protein of unknown function | SAMN05216462_0747 | Not Available | Negative | 948510 - 949526 | 39025.8 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
