Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain protein | SAMN05216462_0632 | Not Available | Negative | 824521 - 824991 | 17121.7 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05216462_0633 | Not Available | Negative | 825154 - 825579 | 15909.0 |
| dna-binding protein, histone-like, putative | SAMN05216462_0634 | Not Available | Negative | 825693 - 826247 | 19382.7 |
| hypothetical protein | SAMN05216462_0635 | Not Available | Negative | 826363 - 826542 | 6611.17 |
| protein of unknown function | SAMN05216462_0636 | Not Available | Negative | 826706 - 828097 | 53485.7 |
| hypothetical protein | SAMN05216462_0637 | Not Available | Negative | 828242 - 828721 | 18505.2 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216462_0638 | Not Available | Negative | 829121 - 831682 | 97048.8 |
| protein of unknown function | SAMN05216462_0639 | Not Available | Negative | 831698 - 832336 | 24743.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216462_0640 | Not Available | Negative | 832341 - 832838 | 19268.5 |
| predicted nucleotidyltransferase component of viral defense system | SAMN05216462_0641 | Not Available | Negative | 833057 - 833932 | 34035.6 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
