Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05216462_0053 | Not Available | Positive | 71860 - 72492 | 24179.8 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05216462_0054 | Not Available | Positive | 72558 - 74468 | 70360.7 |
| trk system potassium uptake protein trka | SAMN05216462_0055 | Not Available | Positive | 74465 - 75820 | 49802.5 |
| trk system potassium uptake protein trkh | SAMN05216462_0056 | Not Available | Positive | 75814 - 77271 | 53763.9 |
| mannose-6-phosphate isomerase | SAMN05216462_0057 | Not Available | Positive | 77290 - 78243 | 35940.6 |
| protein of unknown function | SAMN05216462_0058 | Not Available | Negative | 78226 - 79251 | 40086.6 |
| aaa domain-containing protein, putative abieii toxin, type iv ta system | SAMN05216462_0059 | Not Available | Negative | 79248 - 80084 | 31464.1 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fklb | SAMN05216462_0060 | Not Available | Negative | 80127 - 80762 | 23964.1 |
| glycyl-trna synthetase | SAMN05216462_0061 | Not Available | Negative | 80766 - 82307 | 59548.1 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN05216462_0062 | Not Available | Negative | 82482 - 85802 | 122524.0 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
