Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_0542 | Not Available | Negative | 706076 - 709255 | 116649.0 |
| endoglucanase | SAMN05216462_0543 | Not Available | Negative | 709292 - 710467 | 44106.8 |
| arac-type dna-binding protein | SAMN05216462_0544 | Not Available | Negative | 710607 - 713414 | 104725.0 |
| alpha-galactosidase | SAMN05216462_0545 | Not Available | Negative | 713470 - 715653 | 82853.9 |
| putative mn2+ efflux pump mntp | SAMN05216462_0546 | Not Available | Positive | 715726 - 716346 | 23186.4 |
| iron complex transport system atp-binding protein | SAMN05216462_0547 | Not Available | Positive | 716419 - 717216 | 29098.6 |
| l-threonine o-3-phosphate decarboxylase | SAMN05216462_0548 | Not Available | Positive | 717232 - 718266 | 39395.6 |
| iron complex transport system substrate-binding protein | SAMN05216462_0549 | Not Available | Negative | 718256 - 719347 | 40861.6 |
| protein of unknown function | SAMN05216462_0550 | Not Available | Negative | 719380 - 720129 | 27522.0 |
| hypothetical protein | SAMN05216462_0551 | Not Available | Negative | 720161 - 721279 | 41810.7 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
