Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05216462_0501 | Not Available | Positive | 656619 - 657905 | 47665.1 |
| gh3 auxin-responsive promoter | SAMN05216462_0502 | Not Available | Positive | 657979 - 659487 | 57575.9 |
| ig-like domain-containing protein | SAMN05216462_0503 | Not Available | Positive | 659484 - 661409 | 73031.6 |
| protein of unknown function | SAMN05216462_0504 | Not Available | Positive | 661433 - 662242 | 31420.8 |
| uroporphyrinogen-iii synthase | SAMN05216462_0505 | Not Available | Negative | 662245 - 663027 | 28301.9 |
| major facilitator superfamily protein | SAMN05216462_0506 | Not Available | Negative | 663021 - 664247 | 45857.7 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216462_0507 | Not Available | Negative | 664263 - 666362 | 78273.4 |
| uroporphyrinogen decarboxylase | SAMN05216462_0508 | Not Available | Negative | 666385 - 667410 | 38517.6 |
| hypothetical protein | SAMN05216462_0509 | Not Available | Negative | 667520 - 668857 | 50946.9 |
| hypothetical protein | SAMN05216462_0510 | Not Available | Positive | 669434 - 669826 | 14784.7 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
