Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN05216462_0471 | Not Available | Negative | 621266 - 621748 | 18396.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05216462_0472 | Not Available | Negative | 621755 - 622630 | 33065.3 |
| transcriptional regulator, lyttr family | SAMN05216462_0473 | Not Available | Positive | 622772 - 624376 | 61026.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216462_0474 | Not Available | Negative | 624371 - 626518 | 81232.9 |
| putative endopeptidase | SAMN05216462_0475 | Not Available | Negative | 626512 - 628515 | 76045.5 |
| cell wall-active antibiotics response 4tms yvqf | SAMN05216462_0476 | Not Available | Negative | 628651 - 629211 | 20840.3 |
| carboxypepd_reg-like domain-containing protein | SAMN05216462_0477 | Not Available | Negative | 629340 - 631691 | 87985.8 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216462_0478 | Not Available | Negative | 631741 - 634116 | 88903.9 |
| iron complex transport system permease protein | SAMN05216462_0479 | Not Available | Positive | 634325 - 635335 | 34945.4 |
| hypothetical protein | SAMN05216462_0480 | Not Available | Positive | 635356 - 637131 | 68560.2 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
