Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine kinase | SAMN05216462_0440 | Not Available | Negative | 577354 - 579039 | 64381.9 |
| serine phosphatase rsbu, regulator of sigma subunit | SAMN05216462_0442 | Not Available | Negative | 579614 - 581689 | 78102.8 |
| glycoside/pentoside/hexuronide:cation symporter, gph family | SAMN05216462_0443 | Not Available | Negative | 581772 - 583163 | 50755.2 |
| sialate o-acetylesterase | SAMN05216462_0444 | Not Available | Negative | 583172 - 585124 | 73391.4 |
| glycoside/pentoside/hexuronide:cation symporter, gph family | SAMN05216462_0445 | Not Available | Positive | 585289 - 586737 | 53534.7 |
| glycosyl hydrolases family 43 | SAMN05216462_0446 | Not Available | Positive | 586755 - 587756 | 37866.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216462_0447 | Not Available | Positive | 587749 - 588243 | 19293.0 |
| predicted zn-dependent peptidase | SAMN05216462_0448 | Not Available | Negative | 588236 - 589486 | 46673.6 |
| 7-cyano-7-deazaguanine synthase | SAMN05216462_0449 | Not Available | Negative | 589488 - 590183 | 25564.4 |
| protein of unknown function | SAMN05216462_0450 | Not Available | Negative | 590301 - 591368 | 40629.2 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
