Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | SAMN05216462_0430 | Not Available | Negative | 560469 - 562391 | 73065.1 |
| nitt/taut family transport system substrate-binding protein | SAMN05216462_0431 | Not Available | Negative | 562398 - 563306 | 35204.4 |
| starch-binding associating with outer membrane | SAMN05216462_0432 | Not Available | Negative | 563484 - 565130 | 61884.7 |
| iron complex outermembrane recepter protein | SAMN05216462_0433 | Not Available | Negative | 565162 - 568161 | 110792.0 |
| glycosyl hydrolases family 28 | SAMN05216462_0434 | Not Available | Negative | 568201 - 569505 | 47962.2 |
| sugar or nucleoside kinase, ribokinase family | SAMN05216462_0435 | Not Available | Positive | 569654 - 570538 | 32667.7 |
| hypothetical protein | SAMN05216462_0436 | Not Available | Positive | 570551 - 572962 | 91287.3 |
| alpha-l-arabinofuranosidase | SAMN05216462_0437 | Not Available | Positive | 572974 - 574989 | 75259.3 |
| hypothetical protein | SAMN05216462_0438 | Not Available | Negative | 575047 - 575490 | 17104.3 |
| protein of unknown function | SAMN05216462_0439 | Not Available | Negative | 575644 - 576846 | 45677.9 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
