Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-3 subunit epsilon | SAMN05216462_0410 | Not Available | Negative | 543208 - 543699 | 18534.7 |
| wyl domain-containing protein | SAMN05216462_0411 | Not Available | Negative | 543696 - 544613 | 36318.6 |
| agmatine/peptidylarginine deiminase | SAMN05216462_0412 | Not Available | Positive | 545048 - 546328 | 49290.8 |
| hypothetical protein | SAMN05216462_0413 | Not Available | Positive | 546333 - 547049 | 27498.6 |
| hypothetical protein | SAMN05216462_0414 | Not Available | Positive | 547059 - 547997 | 36977.9 |
| porphyromonas-type peptidyl-arginine deiminase | SAMN05216462_0415 | Not Available | Positive | 548022 - 549245 | 48091.5 |
| hypothetical protein | SAMN05216462_0416 | Not Available | Positive | 549342 - 549755 | 15351.4 |
| hypothetical protein | SAMN05216462_0417 | Not Available | Positive | 549772 - 550527 | 29747.2 |
| hypothetical protein | SAMN05216462_0418 | Not Available | Positive | 550540 - 551073 | 20513.7 |
| hypothetical protein | SAMN05216462_0419 | Not Available | Negative | 551162 - 551551 | 14633.8 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
