Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase-1 | SAMN05216462_0317 | Not Available | Positive | 452444 - 454846 | 91031.6 |
| shikimate kinase | SAMN05216462_0318 | Not Available | Positive | 454843 - 455370 | 20231.8 |
| arginine decarboxylase | SAMN05216462_0319 | Not Available | Positive | 455393 - 457285 | 71797.3 |
| anti-sigma regulatory factor (ser/thr protein kinase) | SAMN05216462_0320 | Not Available | Positive | 457358 - 457777 | 15521.5 |
| anti-sigma b factor antagonist | SAMN05216462_0321 | Not Available | Positive | 457784 - 458086 | 11383.8 |
| ppgpp synthetase catalytic domain-containing protein (rela/spot-type nucleotidyltranferase) | SAMN05216462_0322 | Not Available | Positive | 458086 - 459135 | 39721.6 |
| n-acetylglutamate kinase | SAMN05216462_0323 | Not Available | Positive | 459157 - 459930 | 27240.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216462_0324 | Not Available | Positive | 459989 - 460507 | 20317.3 |
| hypothetical protein | SAMN05216462_0325 | Not Available | Positive | 460497 - 460976 | 18060.3 |
| hypothetical protein | SAMN05216462_0326 | Not Available | Negative | 461136 - 461906 | 28516.0 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
