Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane | SAMN05216462_3200 | Not Available | Negative | 3761008 - 3762933 | 74831.7 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_3201 | Not Available | Negative | 3762951 - 3766088 | 117253.0 |
| protein of unknown function | SAMN05216462_3202 | Not Available | Negative | 3766360 - 3766581 | 8632.79 |
| atp:cob(i)alamin adenosyltransferase | SAMN05216462_3203 | Not Available | Negative | 3766646 - 3767209 | 20795.2 |
| hypothetical protein | SAMN05216462_3204 | Not Available | Negative | 3767221 - 3767775 | 22142.5 |
| hypothetical protein | SAMN05216462_3208 | Not Available | Positive | 3768212 - 3768305 | 3627.34 |
| hypothetical protein | SAMN05216462_3209 | Not Available | Positive | 3768313 - 3768465 | 5671.69 |
| transglutaminase-like superfamily protein | SAMN05216462_3210 | Not Available | Positive | 3768584 - 3769777 | 45579.4 |
| hypothetical protein | SAMN05216462_3211 | Not Available | Positive | 3769787 - 3770308 | 20284.5 |
| predicted transcriptional regulator ydee, contains arac-type dna-binding domain | SAMN05216462_3212 | Not Available | Positive | 3770396 - 3770968 | 21557.0 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
