Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sigma-54 modulation protein | SAMN05216462_3170 | Not Available | Negative | 3717879 - 3718178 | 11377.8 |
| integrase/recombinase xerc | SAMN05216462_3171 | Not Available | Negative | 3718215 - 3719096 | 33583.2 |
| small subunit ribosomal protein s21 | SAMN05216462_3172 | Not Available | Negative | 3719173 - 3719364 | 7567.44 |
| xaa-pro aminopeptidase | SAMN05216462_3173 | Not Available | Negative | 3719555 - 3721333 | 66205.6 |
| malate dehydrogenase | SAMN05216462_3174 | Not Available | Positive | 3721487 - 3722473 | 35665.9 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN05216462_3175 | Not Available | Positive | 3722479 - 3722985 | 18038.4 |
| hypothetical protein | SAMN05216462_3176 | Not Available | Negative | 3722960 - 3724063 | 41866.4 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMN05216462_3177 | Not Available | Negative | 3724097 - 3725338 | 47652.4 |
| glutamyl-trna synthetase | SAMN05216462_3178 | Not Available | Negative | 3725338 - 3726855 | 58010.4 |
| hypothetical protein | SAMN05216462_3179 | Not Available | Positive | 3726942 - 3728993 | 78146.8 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
