Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thymidylate synthase | SAMN05216462_3159 | Not Available | Negative | 3708524 - 3709318 | 30427.3 |
| 16s rrna c967 or c1407 c5-methylase, rsmb/rsmf family | SAMN05216462_3160 | Not Available | Negative | 3709342 - 3710610 | 47402.6 |
| hypothetical protein | SAMN05216462_3161 | Not Available | Positive | 3710724 - 3711413 | 25380.1 |
| phage shock protein c (pspc) family protein | SAMN05216462_3162 | Not Available | Positive | 3711406 - 3711603 | 7614.38 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216462_3163 | Not Available | Positive | 3711614 - 3712168 | 20812.8 |
| protein of unknown function | SAMN05216462_3164 | Not Available | Positive | 3712158 - 3712541 | 14850.5 |
| wd40-like beta propeller repeat | SAMN05216462_3165 | Not Available | Negative | 3712453 - 3714504 | 76401.4 |
| hypothetical protein | SAMN05216462_3166 | Not Available | Negative | 3714566 - 3714763 | 6823.17 |
| hypothetical protein | SAMN05216462_3167 | Not Available | Negative | 3714778 - 3716130 | 48239.4 |
| leucine rich repeat-containing protein | SAMN05216462_3168 | Not Available | Negative | 3716161 - 3717817 | 58865.9 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
