Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fha domain-containing protein | SAMN05216462_3118 | Not Available | Negative | 3663503 - 3664033 | 19827.4 |
| sporulation related domain-containing protein | SAMN05216462_3119 | Not Available | Negative | 3664037 - 3665176 | 42703.0 |
| udpglucose 6-dehydrogenase | SAMN05216462_3120 | Not Available | Positive | 3665250 - 3666569 | 48454.9 |
| protein of unknown function | SAMN05216462_3121 | Not Available | Positive | 3666570 - 3667349 | 29303.6 |
| nad+ diphosphatase | SAMN05216462_3122 | Not Available | Negative | 3667346 - 3668119 | 29146.0 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase | SAMN05216462_3123 | Not Available | Negative | 3668116 - 3669882 | 67830.1 |
| curved dna-binding protein | SAMN05216462_3124 | Not Available | Positive | 3670006 - 3670695 | 25372.2 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN05216462_3125 | Not Available | Negative | 3670675 - 3671421 | 28045.7 |
| uncharacterized conserved protein | SAMN05216462_3126 | Not Available | Positive | 3671558 - 3672676 | 41954.3 |
| yhch/yjgk/yial family protein | SAMN05216462_3127 | Not Available | Positive | 3672703 - 3673149 | 16819.2 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
