Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dgtpase | SAMN05216462_0023 | Not Available | Positive | 30422 - 31762 | 50886.7 |
| chitinase | SAMN05216462_0024 | Not Available | Negative | 31755 - 32906 | 43023.1 |
| ipt/tig domain-containing protein | SAMN05216462_0025 | Not Available | Negative | 32921 - 34276 | 48261.2 |
| starch-binding associating with outer membrane | SAMN05216462_0026 | Not Available | Negative | 34311 - 36011 | 64966.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_0027 | Not Available | Negative | 36016 - 38793 | 102349.0 |
| susd family protein | SAMN05216462_0028 | Not Available | Negative | 38828 - 40759 | 73770.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_0029 | Not Available | Negative | 40795 - 43926 | 115836.0 |
| mfs transporter, fhs family, l-fucose permease | SAMN05216462_0030 | Not Available | Negative | 44107 - 45378 | 46109.8 |
| glucosamine-6-phosphate deaminase | SAMN05216462_0031 | Not Available | Negative | 45392 - 46123 | 27076.0 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05216462_0032 | Not Available | Negative | 46136 - 47080 | 34462.6 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
