Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp pyrophosphokinase | SAMN05216462_3012 | Not Available | Positive | 3546677 - 3548944 | 86827.1 |
| pectinesterase | SAMN05216462_3013 | Not Available | Positive | 3548958 - 3549932 | 36836.7 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN05216462_3014 | Not Available | Positive | 3549982 - 3553224 | 122912.0 |
| dna-binding transcriptional regulator, merr family | SAMN05216462_3015 | Not Available | Negative | 3553261 - 3553608 | 13493.5 |
| alanyl-trna synthetase | SAMN05216462_3016 | Not Available | Positive | 3553740 - 3556403 | 99679.3 |
| topoisomerase-4 subunit a | SAMN05216462_3017 | Not Available | Positive | 3556495 - 3559188 | 102245.0 |
| protein of unknown function | SAMN05216462_3018 | Not Available | Positive | 3559172 - 3559936 | 28976.4 |
| tricorn protease c1 domain-containing protein | SAMN05216462_3019 | Not Available | Positive | 3559933 - 3560982 | 39834.8 |
| hypothetical protein | SAMN05216462_3021 | Not Available | Positive | 3561408 - 3563291 | 67483.8 |
| outer membrane protein ompa | SAMN05216462_3022 | Not Available | Positive | 3563335 - 3564468 | 41713.4 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
