Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stage ii sporulation protein aa (anti-sigma f factor antagonist) | SAMN05216462_3002 | Not Available | Positive | 3538240 - 3538551 | 11593.4 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05216462_3003 | Not Available | Positive | 3538555 - 3539475 | 34705.2 |
| hypothetical protein | SAMN05216462_3004 | Not Available | Negative | 3539538 - 3539906 | 13621.9 |
| protein of unknown function | SAMN05216462_3005 | Not Available | Negative | 3540107 - 3540814 | 26938.5 |
| lipid-a-disaccharide synthase | SAMN05216462_3006 | Not Available | Negative | 3540836 - 3541969 | 42707.1 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | SAMN05216462_3007 | Not Available | Negative | 3541966 - 3542733 | 28644.1 |
| chromosome partitioning protein | SAMN05216462_3008 | Not Available | Positive | 3542856 - 3543623 | 28083.2 |
| chromosome partitioning protein, parb family | SAMN05216462_3009 | Not Available | Positive | 3543626 - 3544555 | 34930.3 |
| hypothetical protein | SAMN05216462_3010 | Not Available | Positive | 3544565 - 3545248 | 25940.3 |
| membrane-bound lytic murein transglycosylase d | SAMN05216462_3011 | Not Available | Positive | 3545255 - 3546640 | 52701.1 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
