Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted kinase | SAMN05216462_2886 | Not Available | Negative | 3398397 - 3401036 | 97744.4 |
| membrane protein yfho | SAMN05216462_2887 | Not Available | Negative | 3401100 - 3403589 | 93739.1 |
| rna methyltransferase, trmh family | SAMN05216462_2888 | Not Available | Positive | 3403672 - 3404490 | 30137.3 |
| adenosylhomocysteine nucleosidase | SAMN05216462_2889 | Not Available | Positive | 3404558 - 3405175 | 22844.2 |
| s-ribosylhomocysteine lyase /quorum-sensing autoinducer 2 (ai-2) synthesis protein luxs | SAMN05216462_2890 | Not Available | Positive | 3405217 - 3405711 | 18880.7 |
| small subunit ribosomal protein s15 | SAMN05216462_2891 | Not Available | Negative | 3405787 - 3406056 | 10385.7 |
| gtp-binding protein | SAMN05216462_2892 | Not Available | Positive | 3406334 - 3408136 | 67719.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN05216462_2893 | Not Available | Negative | 3408187 - 3410595 | 89927.1 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN05216462_2894 | Not Available | Positive | 3410798 - 3413308 | 94014.5 |
| m6 family metalloprotease domain-containing protein | SAMN05216462_2895 | Not Available | Negative | 3413338 - 3414804 | 54859.1 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
