Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux pump subunit acrb | SAMN05216462_2749 | Not Available | Positive | 3234431 - 3237541 | 115460.0 |
| outer membrane protein tolc | SAMN05216462_2750 | Not Available | Positive | 3237614 - 3238999 | 51061.1 |
| hypothetical protein | SAMN05216462_2751 | Not Available | Negative | 3239052 - 3241475 | 89705.2 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN05216462_2752 | Not Available | Negative | 3241501 - 3243813 | 87125.1 |
| alpha-glucosidase | SAMN05216462_2753 | Not Available | Negative | 3243823 - 3245760 | 73660.6 |
| hypothetical protein | SAMN05216462_2754 | Not Available | Positive | 3245989 - 3248391 | 89612.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_2755 | Not Available | Positive | 3248432 - 3251440 | 111343.0 |
| starch-binding associating with outer membrane | SAMN05216462_2756 | Not Available | Positive | 3251454 - 3253124 | 62334.8 |
| protein of unknown function | SAMN05216462_2757 | Not Available | Positive | 3253166 - 3254158 | 36657.8 |
| hypothetical protein | SAMN05216462_2758 | Not Available | Positive | 3254210 - 3254620 | 14710.0 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
