Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| utp-glucose-1-phosphate uridylyltransferase | SAMN05216462_2708 | Not Available | Negative | 3191528 - 3193462 | 72342.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05216462_2709 | Not Available | Positive | 3193648 - 3194244 | 23379.0 |
| ribulose-phosphate 3-epimerase | SAMN05216462_2710 | Not Available | Negative | 3194236 - 3194883 | 23441.6 |
| hypothetical protein | SAMN05216462_2711 | Not Available | Negative | 3194895 - 3195029 | 5260.32 |
| methionyl-trna formyltransferase | SAMN05216462_2712 | Not Available | Negative | 3195080 - 3196054 | 36458.2 |
| chloride channel protein, cic family | SAMN05216462_2713 | Not Available | Negative | 3196067 - 3197872 | 66322.0 |
| l-threonylcarbamoyladenylate synthase | SAMN05216462_2714 | Not Available | Negative | 3198007 - 3198591 | 21771.0 |
| peptide chain release factor 3 | SAMN05216462_2715 | Not Available | Negative | 3198594 - 3200183 | 60804.2 |
| dtdp-4-dehydrorhamnose reductase | SAMN05216462_2716 | Not Available | Negative | 3200180 - 3201028 | 31764.8 |
| protein of unknown function | SAMN05216462_2717 | Not Available | Negative | 3201179 - 3201724 | 21775.1 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
