Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05216462_0257 | Not Available | Positive | 369125 - 372334 | 119782.0 |
| starch-binding associating with outer membrane | SAMN05216462_0258 | Not Available | Positive | 372365 - 374434 | 78653.9 |
| protein of unknown function | SAMN05216462_0259 | Not Available | Positive | 374457 - 376049 | 58587.4 |
| rhamnogalacturonan endolyase | SAMN05216462_0260 | Not Available | Positive | 376064 - 377956 | 70064.5 |
| alpha-l-fucosidase 2 | SAMN05216462_0261 | Not Available | Positive | 377967 - 380501 | 94667.4 |
| arabinogalactan endo-1,4-beta-galactosidase | SAMN05216462_0262 | Not Available | Negative | 380491 - 381513 | 38811.7 |
| hypothetical protein | SAMN05216462_0263 | Not Available | Positive | 381653 - 382513 | 32164.7 |
| beta-xylosidase | SAMN05216462_0264 | Not Available | Negative | 382514 - 384640 | 80123.6 |
| arabinan endo-1,5-alpha-l-arabinosidase | SAMN05216462_0265 | Not Available | Negative | 384671 - 385723 | 39528.0 |
| c-terminal of glycosyl hydrolases family 43 | SAMN05216462_0266 | Not Available | Negative | 385744 - 387666 | 70848.6 |
Pathways
401 pathways
Health Effects
No health effects information available for this bacterium.
