Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor proteins, mostly fe transport | SAMN05216462_2610 | Not Available | Positive | 3109152 - 3111608 | 89959.4 |
| histidine kinase | SAMN05216462_2611 | Not Available | Positive | 3111686 - 3112735 | 40976.4 |
| two component transcriptional regulator, lyttr family | SAMN05216462_2612 | Not Available | Positive | 3112738 - 3113475 | 28046.2 |
| glutamate dehydrogenase (nadp+) | SAMN05216462_2613 | Not Available | Positive | 3113582 - 3114919 | 48729.7 |
| rare lipoprotein a | SAMN05216462_2614 | Not Available | Positive | 3114973 - 3115485 | 18811.7 |
| glycine zipper | SAMN05216462_2615 | Not Available | Negative | 3115494 - 3116162 | 24351.0 |
| large subunit ribosomal protein l17 | SAMN05216462_2616 | Not Available | Negative | 3116313 - 3116807 | 18141.9 |
| dna-directed rna polymerase subunit alpha | SAMN05216462_2617 | Not Available | Negative | 3116838 - 3117830 | 37493.9 |
| small subunit ribosomal protein s4 | SAMN05216462_2618 | Not Available | Negative | 3117845 - 3118453 | 22899.7 |
| ssu ribosomal protein s11p | SAMN05216462_2619 | Not Available | Negative | 3118494 - 3118883 | 14010.1 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
