Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate dehydrogenase | SAMN05216462_2560 | Not Available | Positive | 3033377 - 3034276 | 32861.6 |
| phosphoribosylglycinamide formyltransferase-1 | SAMN05216462_2561 | Not Available | Positive | 3034277 - 3034843 | 20822.3 |
| dihydrolipoamide dehydrogenase | SAMN05216462_2562 | Not Available | Negative | 3034861 - 3036138 | 45787.6 |
| glycine dehydrogenase subunit 2 | SAMN05216462_2563 | Not Available | Negative | 3036135 - 3037547 | 51767.0 |
| glycine dehydrogenase subunit 1 | SAMN05216462_2564 | Not Available | Negative | 3037544 - 3038860 | 48341.3 |
| glycine cleavage system h protein | SAMN05216462_2565 | Not Available | Negative | 3038892 - 3039272 | 13802.9 |
| aminomethyltransferase | SAMN05216462_2566 | Not Available | Negative | 3039308 - 3040417 | 41084.6 |
| lipoic acid synthetase/lipoate-protein ligase a | SAMN05216462_2567 | Not Available | Negative | 3040432 - 3041121 | 26339.9 |
| hypothetical protein | SAMN05216462_2568 | Not Available | Negative | 3041213 - 3042178 | 36677.5 |
| aquaporin z | SAMN05216462_2569 | Not Available | Positive | 3042286 - 3042960 | 22940.7 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
