Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-aspartate oxidase | SAMN05216462_2540 | Not Available | Negative | 3007987 - 3009573 | 59519.2 |
| carboxypepd_reg-like domain-containing protein | SAMN05216462_2541 | Not Available | Positive | 3009693 - 3010907 | 46182.1 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN05216462_2542 | Not Available | Positive | 3010925 - 3012154 | 44993.0 |
| phosphoserine phosphatase | SAMN05216462_2543 | Not Available | Positive | 3012212 - 3013441 | 45655.4 |
| a/g-specific dna-adenine glycosylase | SAMN05216462_2544 | Not Available | Positive | 3013442 - 3014482 | 39536.5 |
| phosphate-selective porin opro and oprp | SAMN05216462_2545 | Not Available | Positive | 3014489 - 3015637 | 42992.1 |
| acid phosphatase (class a) | SAMN05216462_2546 | Not Available | Positive | 3015680 - 3016429 | 28325.1 |
| c_gcaxxg_c_c family probable redox protein | SAMN05216462_2547 | Not Available | Negative | 3016449 - 3016931 | 17261.7 |
| amidohydrolase family protein | SAMN05216462_2548 | Not Available | Negative | 3016931 - 3017350 | 15756.7 |
| hypothetical protein | SAMN05216462_2549 | Not Available | Negative | 3017380 - 3017754 | 13382.0 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
