Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Prevotellaceae
Genus
Xylanibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Prevotellaceae |
| Genus | Xylanibacter |
| Species | Xylanibacter ruminicola |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Not Available |
| Number of membranes | 2 |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
980486 bp
Thymine Count
996970 bp
Guanine Count
895359 bp
Cytosine Count
898241 bp
Genome Length
3773855 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose 4-epimerase | SAMN05216462_2497 | Not Available | Negative | 2967220 - 2968236 | 37189.6 |
| transcription antitermination factor nusg | SAMN05216462_2498 | Not Available | Negative | 2968806 - 2969498 | 26041.5 |
| protein of unknown function | SAMN05216462_2499 | Not Available | Positive | 2970243 - 2970467 | 8871.57 |
| protein of unknown function | SAMN05216462_2500 | Not Available | Positive | 2970464 - 2970937 | 18428.1 |
| hypothetical protein | SAMN05216462_2501 | Not Available | Positive | 2970934 - 2971155 | 8517.18 |
| hypothetical protein | SAMN05216462_2502 | Not Available | Positive | 2971172 - 2971318 | 5611.8 |
| hypothetical protein | SAMN05216462_2503 | Not Available | Positive | 2971412 - 2971594 | 6909.49 |
| nucleotidyltransferase domain-containing protein | SAMN05216462_2504 | Not Available | Positive | 2971606 - 2971935 | 12402.4 |
| uncharacterized protein, contains hepn domain, upf0332 family | SAMN05216462_2505 | Not Available | Positive | 2971926 - 2972339 | 15662.8 |
| hypothetical protein | SAMN05216462_2506 | Not Available | Positive | 2972355 - 2972594 | 9211.85 |
Pathways
275 pathways
Health Effects
No health effects information available for this bacterium.
